Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.37■□□□□ 0.53
CTNND1O60716 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.37■□□□□ 0.53
CTNND1O60716 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CTNND1O60716 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.37■□□□□ 0.53
CTNND1O60716 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
CTNND1O60716 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CTNND1O60716 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.36■□□□□ 0.53
CTNND1O60716 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 GAPDHP40-201ENST00000505218 1006 ntBASIC18.36■□□□□ 0.53
CTNND1O60716 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNND1O60716 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.36■□□□□ 0.53
CTNND1O60716 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 OR6D1P-203ENST00000641209 4860 ntBASIC18.36■□□□□ 0.53
CTNND1O60716 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNND1O60716 CROCCP1-201ENST00000426910 5675 ntBASIC18.36■□□□□ 0.53
CTNND1O60716 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTNND1O60716 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTNND1O60716 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.35■□□□□ 0.53
CTNND1O60716 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 AP001582.1-201ENST00000525856 295 ntBASIC18.35■□□□□ 0.53
CTNND1O60716 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 AC025279.2-201ENST00000569730 653 ntBASIC18.35■□□□□ 0.53
CTNND1O60716 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.35■□□□□ 0.53
CTNND1O60716 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.35■□□□□ 0.53
CTNND1O60716 AP005019.2-201ENST00000615104 511 ntBASIC18.35■□□□□ 0.53
CTNND1O60716 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTNND1O60716 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CTNND1O60716 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTNND1O60716 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNND1O60716 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTNND1O60716 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTNND1O60716 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms