Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.4■□□□□ 0.22
MSI1O43347 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.4■□□□□ 0.22
MSI1O43347 WASH4P-201ENST00000564273 1246 ntBASIC16.4■□□□□ 0.22
MSI1O43347 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.4■□□□□ 0.22
MSI1O43347 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MSI1O43347 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.4■□□□□ 0.22
MSI1O43347 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.4■□□□□ 0.22
MSI1O43347 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 AC092127.1-201ENST00000567093 3455 ntBASIC16.4■□□□□ 0.22
MSI1O43347 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
MSI1O43347 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.39■□□□□ 0.21
MSI1O43347 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 AC132872.4-202ENST00000622924 2756 ntBASIC16.39■□□□□ 0.21
MSI1O43347 AP005117.1-202ENST00000581724 1908 ntBASIC16.39■□□□□ 0.21
MSI1O43347 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.39■□□□□ 0.21
MSI1O43347 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MSI1O43347 AC055876.2-201ENST00000531834 546 ntBASIC16.39■□□□□ 0.21
MSI1O43347 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.39■□□□□ 0.21
MSI1O43347 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.39■□□□□ 0.21
MSI1O43347 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 AC007431.3-201ENST00000623221 587 ntBASIC16.39■□□□□ 0.21
MSI1O43347 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MSI1O43347 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MSI1O43347 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.39■□□□□ 0.21
MSI1O43347 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.39■□□□□ 0.21
MSI1O43347 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.38■□□□□ 0.21
MSI1O43347 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.38■□□□□ 0.21
MSI1O43347 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.38■□□□□ 0.21
MSI1O43347 AP005018.1-201ENST00000525475 301 ntBASIC16.38■□□□□ 0.21
MSI1O43347 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 AC008494.3-201ENST00000606615 944 ntBASIC16.38■□□□□ 0.21
MSI1O43347 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 AL391069.4-201ENST00000609583 481 ntBASIC16.38■□□□□ 0.21
MSI1O43347 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.38■□□□□ 0.21
MSI1O43347 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms