Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 AL390755.1-201ENST00000623716 2027 ntBASIC15.01□□□□□ -0.01
UPK1AO00322 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UPK1AO00322 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
UPK1AO00322 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 AC013726.1-201ENST00000563747 2285 ntBASIC15.01□□□□□ -0.01
UPK1AO00322 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.01□□□□□ -0.01
UPK1AO00322 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UPK1AO00322 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.01□□□□□ -0.01
UPK1AO00322 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
UPK1AO00322 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 AC004987.2-201ENST00000395959 1148 ntBASIC15□□□□□ -0.01
UPK1AO00322 KRT18P13-201ENST00000400056 1290 ntBASIC15□□□□□ -0.01
UPK1AO00322 AC254562.1-201ENST00000417586 456 ntBASIC15□□□□□ -0.01
UPK1AO00322 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 RBPMS2P1-201ENST00000437762 623 ntBASIC15□□□□□ -0.01
UPK1AO00322 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 AP006288.1-201ENST00000446065 395 ntBASIC15□□□□□ -0.01
UPK1AO00322 AL139010.1-201ENST00000454878 894 ntBASIC15□□□□□ -0.01
UPK1AO00322 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15□□□□□ -0.01
UPK1AO00322 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15□□□□□ -0.01
UPK1AO00322 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
UPK1AO00322 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15□□□□□ -0.01
UPK1AO00322 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 AC009093.7-201ENST00000623853 1223 ntBASIC15□□□□□ -0.01
UPK1AO00322 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15□□□□□ -0.01
UPK1AO00322 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 AC134684.3-201ENST00000641758 218 ntBASIC15□□□□□ -0.01
UPK1AO00322 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15□□□□□ -0.01
UPK1AO00322 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UPK1AO00322 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
UPK1AO00322 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15□□□□□ -0.01
UPK1AO00322 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms