Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.53■□□□□ 0.08
CDC7O00311 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDC7O00311 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 SPDYE17-201ENST00000412399 783 ntBASIC15.53■□□□□ 0.08
CDC7O00311 AC254562.1-201ENST00000417586 456 ntBASIC15.53■□□□□ 0.08
CDC7O00311 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.53■□□□□ 0.08
CDC7O00311 AC027612.4-201ENST00000605371 583 ntBASIC15.53■□□□□ 0.08
CDC7O00311 AL596442.2-201ENST00000610240 980 ntBASIC15.53■□□□□ 0.08
CDC7O00311 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC7O00311 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC7O00311 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.53■□□□□ 0.08
CDC7O00311 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDC7O00311 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.52■□□□□ 0.08
CDC7O00311 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC7O00311 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDC7O00311 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 AC136604.1-201ENST00000418535 575 ntBASIC15.52■□□□□ 0.08
CDC7O00311 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC7O00311 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC7O00311 AP006288.1-201ENST00000446065 395 ntBASIC15.52■□□□□ 0.08
CDC7O00311 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.52■□□□□ 0.08
CDC7O00311 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDC7O00311 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.52■□□□□ 0.08
CDC7O00311 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 AP001059.3-201ENST00000619053 235 ntBASIC15.52■□□□□ 0.08
CDC7O00311 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC7O00311 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDC7O00311 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDC7O00311 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 NORAD-201ENST00000565493 5339 ntBASIC15.52■□□□□ 0.07
CDC7O00311 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.52■□□□□ 0.07
CDC7O00311 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.52■□□□□ 0.07
CDC7O00311 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.52■□□□□ 0.07
CDC7O00311 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDC7O00311 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms