Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX39AO00148 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX39AO00148 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX39AO00148 RARRES2P5-201ENST00000564013 466 ntBASIC17.77■□□□□ 0.44
DDX39AO00148 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 AC239800.4-201ENST00000603712 296 ntBASIC17.77■□□□□ 0.44
DDX39AO00148 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX39AO00148 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.77■□□□□ 0.43
DDX39AO00148 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.77■□□□□ 0.43
DDX39AO00148 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DDX39AO00148 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.77■□□□□ 0.43
DDX39AO00148 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
DDX39AO00148 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.77■□□□□ 0.43
DDX39AO00148 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX39AO00148 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DDX39AO00148 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 AC138969.3-201ENST00000546612 1459 ntBASIC17.76■□□□□ 0.43
DDX39AO00148 AC138932.2-201ENST00000548268 1459 ntBASIC17.76■□□□□ 0.43
DDX39AO00148 AC126755.4-201ENST00000549796 1459 ntBASIC17.76■□□□□ 0.43
DDX39AO00148 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DDX39AO00148 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 AL513523.2-202ENST00000427283 2040 ntBASIC17.76■□□□□ 0.43
DDX39AO00148 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX39AO00148 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX39AO00148 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.76■□□□□ 0.43
DDX39AO00148 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.76■□□□□ 0.43
DDX39AO00148 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX39AO00148 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX39AO00148 CTBP2P3-201ENST00000585629 1255 ntBASIC17.76■□□□□ 0.43
DDX39AO00148 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
DDX39AO00148 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX39AO00148 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX39AO00148 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX39AO00148 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
DDX39AO00148 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
DDX39AO00148 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX39AO00148 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX39AO00148 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
DDX39AO00148 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX39AO00148 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 COX5BP8-201ENST00000416911 349 ntBASIC17.75■□□□□ 0.43
DDX39AO00148 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX39AO00148 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX39AO00148 ELK1P1-201ENST00000485699 580 ntBASIC17.75■□□□□ 0.43
DDX39AO00148 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX39AO00148 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.75■□□□□ 0.43
DDX39AO00148 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX39AO00148 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.75■□□□□ 0.43
DDX39AO00148 AC093726.1-201ENST00000608064 963 ntBASIC17.75■□□□□ 0.43
DDX39AO00148 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX39AO00148 AL358472.5-202ENST00000641448 1267 ntBASIC17.75■□□□□ 0.43
DDX39AO00148 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
DDX39AO00148 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX39AO00148 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX39AO00148 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms