Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 DNM1P51-201ENST00000558149 522 ntBASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 SNORD3B-2-202ENST00000571722 791 ntBASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 AL162426.1-201ENST00000624141 743 ntBASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM88BA6NKF7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM88BA6NKF7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 C2orf69P1-201ENST00000563532 1093 ntBASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 AL132994.2-201ENST00000603120 687 ntBASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM88BA6NKF7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms