Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 AC068587.6-202ENST00000641839 5619 ntBASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 SOCS2P1-201ENST00000417727 557 ntBASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 KRT43P-201ENST00000434019 910 ntBASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 AL049840.4-201ENST00000602422 811 ntBASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TBC1D3FA6NER0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.71■□□□□ 0.1
TBC1D3FA6NER0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TBC1D3FA6NER0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.71■□□□□ 0.1
TBC1D3FA6NER0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 INTS4P2-202ENST00000614726 2019 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 ACTG1P3-201ENST00000431775 1114 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RPS2P32-201ENST00000439199 892 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 ENPP7P5-201ENST00000541031 1031 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 AC011477.6-201ENST00000604980 1927 ntBASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.7■□□□□ 0.1
TBC1D3FA6NER0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms