Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AZGP1P1-201ENST00000411909 902 ntBASIC14.57□□□□□ -0.08
CDHR4A6H8M9 SPDYE17-201ENST00000412399 783 ntBASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AC136604.1-201ENST00000418535 575 ntBASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 AC003101.2-201ENST00000612557 442 ntBASIC14.57□□□□□ -0.08
CDHR4A6H8M9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.57□□□□□ -0.08
CDHR4A6H8M9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC254562.1-201ENST00000417586 456 ntBASIC14.56□□□□□ -0.08
CDHR4A6H8M9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AL133215.2-201ENST00000609242 977 ntBASIC14.56□□□□□ -0.08
CDHR4A6H8M9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AL035456.1-201ENST00000456064 1369 ntBASIC14.56□□□□□ -0.08
CDHR4A6H8M9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDHR4A6H8M9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 AC112693.3-201ENST00000624819 1983 ntBASIC14.55□□□□□ -0.08
CDHR4A6H8M9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 AC138035.3-201ENST00000622706 2791 ntBASIC14.55□□□□□ -0.08
CDHR4A6H8M9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDHR4A6H8M9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms