Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 CU633904.3-201ENST00000624042 1029 ntBASIC21.09■□□□□ 0.97
SBNO1A3KN83 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 MTHFR-217ENST00000641820 1569 ntBASIC21.09■□□□□ 0.97
SBNO1A3KN83 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SBNO1A3KN83 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SBNO1A3KN83 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.08■□□□□ 0.97
SBNO1A3KN83 AC026471.1-201ENST00000564629 3026 ntBASIC21.08■□□□□ 0.97
SBNO1A3KN83 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SBNO1A3KN83 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SBNO1A3KN83 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SBNO1A3KN83 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SBNO1A3KN83 MIR769-201ENST00000390225 118 ntBASIC21.08■□□□□ 0.96
SBNO1A3KN83 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 LDHBP1-201ENST00000455730 1119 ntBASIC21.08■□□□□ 0.96
SBNO1A3KN83 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.08■□□□□ 0.96
SBNO1A3KN83 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SBNO1A3KN83 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SBNO1A3KN83 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SBNO1A3KN83 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.07■□□□□ 0.96
SBNO1A3KN83 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 COX5BP1-201ENST00000507622 393 ntBASIC21.07■□□□□ 0.96
SBNO1A3KN83 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SBNO1A3KN83 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 U62317.3-201ENST00000608319 855 ntBASIC21.07■□□□□ 0.96
SBNO1A3KN83 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SBNO1A3KN83 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 MAGEA5-201ENST00000446757 942 ntBASIC21.06■□□□□ 0.96
SBNO1A3KN83 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SBNO1A3KN83 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SBNO1A3KN83 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SBNO1A3KN83 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.05■□□□□ 0.96
SBNO1A3KN83 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.05■□□□□ 0.96
SBNO1A3KN83 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SBNO1A3KN83 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.05■□□□□ 0.96
SBNO1A3KN83 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SBNO1A3KN83 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SBNO1A3KN83 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SBNO1A3KN83 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms