Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 C1QBPP1-201ENST00000400117 770 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ACA64.2-201ENST00000459014 129 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MIR4313-201ENST00000580760 101 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 AC008735.3-201ENST00000596646 500 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 AC000095.1-201ENST00000603208 874 ntBASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV5A0A0B4J1U4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 LINC02447-202ENST00000501888 2146 ntBASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AL133267.1-201ENST00000398220 340 ntBASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AC234783.1-201ENST00000441761 496 ntBASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 VDAC1P7-201ENST00000462417 847 ntBASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AC120045.2-201ENST00000567334 178 ntBASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV5A0A0B4J1U4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms