Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.41■□□□□ 0.22
YIPF1Q9Y548 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC099336.1-201ENST00000417053 1171 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 RPL7P3-201ENST00000441388 714 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC007551.1-201ENST00000457394 519 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC092658.1-201ENST00000505836 891 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AP001582.1-201ENST00000525856 295 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF1Q9Y548 REXO1L6P-201ENST00000603433 1515 ntBASIC16.4■□□□□ 0.22
YIPF1Q9Y548 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
YIPF1Q9Y548 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC022137.2-201ENST00000503482 481 ntBASIC16.39■□□□□ 0.21
YIPF1Q9Y548 GAPDHP40-201ENST00000505218 1006 ntBASIC16.39■□□□□ 0.21
YIPF1Q9Y548 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF1Q9Y548 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms