Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AC020658.6-201ENST00000623564 1870 ntBASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 TARDBPP1-201ENST00000442013 1203 ntBASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.98□□□□□ -0.01
ATG4BQ9Y4P1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC136621.1-201ENST00000624017 2304 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC010336.2-201ENST00000564226 506 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC005498.2-205ENST00000593218 784 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC100757.3-201ENST00000622361 1406 ntBASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4BQ9Y4P1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4BQ9Y4P1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms