Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
IFT52Q9Y366 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
IFT52Q9Y366 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.91□□□□□ -0.02
IFT52Q9Y366 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFT52Q9Y366 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.91□□□□□ -0.02
IFT52Q9Y366 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFT52Q9Y366 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFT52Q9Y366 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFT52Q9Y366 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 SSR4P1-203ENST00000599569 2260 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 AC006486.2-201ENST00000624246 2199 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 TFAMP1-201ENST00000412727 736 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 RN7SL589P-201ENST00000481268 310 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AL138918.1-201ENST00000568306 659 ntBASIC14.9□□□□□ -0.02
IFT52Q9Y366 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFT52Q9Y366 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
IFT52Q9Y366 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AL355306.1-201ENST00000415580 579 ntBASIC14.89□□□□□ -0.03
IFT52Q9Y366 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SLC25A1P1-201ENST00000528351 927 ntBASIC14.89□□□□□ -0.03
IFT52Q9Y366 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AL135744.1-201ENST00000565098 629 ntBASIC14.89□□□□□ -0.03
IFT52Q9Y366 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AC027307.2-201ENST00000591252 911 ntBASIC14.89□□□□□ -0.03
IFT52Q9Y366 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AC091812.2-201ENST00000619081 385 ntBASIC14.89□□□□□ -0.03
IFT52Q9Y366 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IFT52Q9Y366 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFT52Q9Y366 AC005252.3-201ENST00000623855 2258 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms