Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AC093724.1-201ENST00000448659 1027 ntBASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AC132008.2-207ENST00000454517 770 ntBASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AP001282.1-201ENST00000531301 1499 ntBASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 AJ011931.1-201ENST00000618749 2492 ntBASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RCL1Q9Y2P8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 RCN1P1-201ENST00000400413 996 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AL031133.1-201ENST00000406807 723 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 RBM17P3-201ENST00000417687 1192 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AC021097.1-201ENST00000607902 574 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 GGTLC5P-201ENST00000617623 998 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AC134407.2-201ENST00000625089 1978 ntBASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RCL1Q9Y2P8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms