Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AL079307.3-201ENST00000556114 283 ntBASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AL133215.2-201ENST00000609242 977 ntBASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AC132872.4-202ENST00000622924 2756 ntBASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 KRT8P12-202ENST00000472924 1397 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 AC011477.6-201ENST00000604980 1927 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 IGHV3-42-201ENST00000520410 361 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 BANF1P1-201ENST00000553684 263 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 MIR6069-201ENST00000620069 79 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.24□□□□□ -0.13
PARPBPQ9NWS1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 TCAF2P1-201ENST00000291129 2421 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms