Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.17■□□□□ 0.5
LMBRD1Q9NUN5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC097359.2-201ENST00000604992 2389 ntBASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC108751.1-201ENST00000490852 363 ntBASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AL450472.2-201ENST00000603663 1156 ntBASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC027601.5-201ENST00000624065 2482 ntBASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMBRD1Q9NUN5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 RPS8P6-201ENST00000426177 609 ntBASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 HCG4B-203ENST00000450128 991 ntBASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 AC010507.1-201ENST00000633895 436 ntBASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 WASH3P-207ENST00000560956 1394 ntBASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 FO538757.1-201ENST00000623083 1397 ntBASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.15■□□□□ 0.5
LMBRD1Q9NUN5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.14■□□□□ 0.5
LMBRD1Q9NUN5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMBRD1Q9NUN5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms