Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AC136632.2-201ENST00000512891 861 ntBASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 AL805961.1-202ENST00000641562 540 ntBASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AC126365.1-201ENST00000578585 1514 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AC073621.1-201ENST00000392730 636 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CRYGEP-201ENST00000412192 528 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 MROH4P-201ENST00000431302 1578 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CEND1P1-201ENST00000451006 455 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 COX20P2-201ENST00000452636 358 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AL078644.1-201ENST00000609881 752 ntBASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCM2LQ9NUG4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 FGD5P1-202ENST00000614866 2498 ntBASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 AC005912.2-201ENST00000619492 2400 ntBASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms