Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 C1QBPP1-201ENST00000400117 770 ntBASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 AP001258.2-201ENST00000529891 490 ntBASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 AC005252.2-201ENST00000624630 1141 ntBASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM7Q9NR12 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 DOC2GP-204ENST00000639052 2548 ntBASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM7Q9NR12 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms