Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 KRT8P44-201ENST00000441609 1350 ntBASIC17.55■□□□□ 0.4
VTA1Q9NP79 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 PFN1P12-201ENST00000455938 534 ntBASIC17.55■□□□□ 0.4
VTA1Q9NP79 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 BX539320.1-201ENST00000623759 877 ntBASIC17.55■□□□□ 0.4
VTA1Q9NP79 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTA1Q9NP79 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VTA1Q9NP79 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC020907.1-201ENST00000616460 1350 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AL133338.1-201ENST00000565695 1517 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC108725.1-201ENST00000495472 409 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC023310.1-201ENST00000554836 735 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC009542.2-202ENST00000619004 1067 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AC069224.1-201ENST00000566372 1715 ntBASIC17.54■□□□□ 0.4
VTA1Q9NP79 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
VTA1Q9NP79 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTA1Q9NP79 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 AC124067.4-201ENST00000519691 2379 ntBASIC17.53■□□□□ 0.4
VTA1Q9NP79 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 KRT8P35-201ENST00000483942 1338 ntBASIC17.53■□□□□ 0.4
VTA1Q9NP79 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms