Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC004898.1-201ENST00000451057 766 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 SCARNA20.5-201ENST00000516991 142 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AP006547.1-201ENST00000563435 692 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC015910.1-201ENST00000579400 975 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC132938.4-201ENST00000623835 848 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 NKILA-202ENST00000614771 2598 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HIPK3Q9H422 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK3Q9H422 AC138028.6-201ENST00000616106 1482 ntBASIC17.18■□□□□ 0.34
HIPK3Q9H422 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 OR6D1P-203ENST00000641209 4860 ntBASIC17.17■□□□□ 0.34
HIPK3Q9H422 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 MIR1202-201ENST00000408529 83 ntBASIC17.17■□□□□ 0.34
HIPK3Q9H422 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 HOMER2P2-201ENST00000451621 847 ntBASIC17.17■□□□□ 0.34
HIPK3Q9H422 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 AC104982.3-201ENST00000581995 514 ntBASIC17.17■□□□□ 0.34
HIPK3Q9H422 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK3Q9H422 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK3Q9H422 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms