Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 TREML5P-201ENST00000421694 576 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 KRT18P64-201ENST00000434946 1219 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CYMP-203ENST00000474680 1263 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AC074044.1-201ENST00000609673 707 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AL590560.3-201ENST00000623350 461 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 AC126365.1-201ENST00000578585 1514 ntBASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSER1Q9C0I3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 TSSK5P-201ENST00000423978 907 ntBASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 SDHAP3-202ENST00000515467 728 ntBASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 AF228730.6-201ENST00000641497 218 ntBASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 AC084121.3-201ENST00000641716 218 ntBASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCSER1Q9C0I3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 AC100757.3-201ENST00000622361 1406 ntBASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCSER1Q9C0I3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms