Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 AL031731.1-201ENST00000642131 2094 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 AL589702.1-201ENST00000641229 1509 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 AC022188.1-201ENST00000620960 1664 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC006449.5-201ENST00000610658 2098 ntBASIC14.29□□□□□ -0.12
USB1Q9BQ65 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC241585.1-201ENST00000433527 519 ntBASIC14.29□□□□□ -0.12
USB1Q9BQ65 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 BCRP1-201ENST00000444246 691 ntBASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 PCGF3-213ENST00000620529 1899 ntBASIC14.29□□□□□ -0.12
USB1Q9BQ65 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.29□□□□□ -0.12
USB1Q9BQ65 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
USB1Q9BQ65 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms