Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RHOQP3-201ENST00000437982 621 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
VGLL1Q99990 AC096734.2-201ENST00000562054 433 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 AC002347.1-201ENST00000569543 541 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 AL773604.1-201ENST00000617417 272 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 AC116407.3-201ENST00000623905 1129 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.08□□□□□ -0.48
VGLL1Q99990 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 PCDHA3-202ENST00000532566 4594 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 PMS2P7-201ENST00000506558 1336 ntBASIC12.08□□□□□ -0.48
VGLL1Q99990 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 SNX18-202ENST00000343017 3140 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 AL031284.1-201ENST00000419297 478 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 GPX1P2-201ENST00000429271 606 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.07□□□□□ -0.48
VGLL1Q99990 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.07□□□□□ -0.48
VGLL1Q99990 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC023141.13-201ENST00000604991 943 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC007064.4-201ENST00000637740 555 ntBASIC12.07□□□□□ -0.48
VGLL1Q99990 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VGLL1Q99990 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
VGLL1Q99990 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.07□□□□□ -0.48
VGLL1Q99990 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VGLL1Q99990 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms