Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.15
VRK1Q99986 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
VRK1Q99986 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
VRK1Q99986 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.08□□□□□ -0.16
VRK1Q99986 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.08□□□□□ -0.16
VRK1Q99986 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK1Q99986 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 SPDYE14P-201ENST00000442619 822 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 PRYP6-201ENST00000514804 343 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 AC105233.2-201ENST00000523697 349 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 AF228730.5-201ENST00000530288 346 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.08□□□□□ -0.16
VRK1Q99986 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK1Q99986 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 AC005498.2-205ENST00000593218 784 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK1Q99986 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.08□□□□□ -0.16
VRK1Q99986 AC013467.2-201ENST00000605472 835 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 LINC02084-201ENST00000606069 1096 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.08□□□□□ -0.16
VRK1Q99986 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 AC013268.4-201ENST00000637413 2228 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
VRK1Q99986 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VRK1Q99986 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK1Q99986 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 SBF1P1-201ENST00000444527 5631 ntBASIC14.08□□□□□ -0.16
VRK1Q99986 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK1Q99986 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 AL161772.1-201ENST00000610494 4412 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VRK1Q99986 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VRK1Q99986 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK1Q99986 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK1Q99986 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK1Q99986 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.07□□□□□ -0.16
VRK1Q99986 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.07□□□□□ -0.16
VRK1Q99986 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.07□□□□□ -0.16
VRK1Q99986 RNA5SP421-201ENST00000516864 134 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 SPCS2P1-201ENST00000561636 679 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.07□□□□□ -0.16
VRK1Q99986 MIR3197-201ENST00000582241 73 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 AC015911.4-201ENST00000588022 1070 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.07□□□□□ -0.16
VRK1Q99986 AC003101.2-201ENST00000612557 442 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.07□□□□□ -0.16
VRK1Q99986 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
VRK1Q99986 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VRK1Q99986 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VRK1Q99986 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VRK1Q99986 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 KRT8P39-201ENST00000396270 1433 ntBASIC14.07□□□□□ -0.16
VRK1Q99986 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK1Q99986 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 AL645728.1-201ENST00000366221 2101 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms