Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC090857.1-201ENST00000527400 390 ntBASIC20.46■□□□□ 0.87
ABCA3Q99758 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.46■□□□□ 0.87
ABCA3Q99758 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.46■□□□□ 0.87
ABCA3Q99758 AP001065.2-201ENST00000617205 644 ntBASIC20.46■□□□□ 0.87
ABCA3Q99758 AL136295.7-201ENST00000619226 1200 ntBASIC20.46■□□□□ 0.87
ABCA3Q99758 Z98259.2-201ENST00000641583 609 ntBASIC20.46■□□□□ 0.87
ABCA3Q99758 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ABCA3Q99758 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
ABCA3Q99758 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.46■□□□□ 0.87
ABCA3Q99758 AL008718.2-201ENST00000609206 1313 ntBASIC20.46■□□□□ 0.87
ABCA3Q99758 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.45■□□□□ 0.86
ABCA3Q99758 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ABCA3Q99758 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 RN7SKP214-201ENST00000364208 315 ntBASIC20.45■□□□□ 0.86
ABCA3Q99758 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.45■□□□□ 0.86
ABCA3Q99758 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 AC092171.3-201ENST00000610122 2651 ntBASIC20.45■□□□□ 0.86
ABCA3Q99758 AC007613.1-201ENST00000572811 2597 ntBASIC20.45■□□□□ 0.86
ABCA3Q99758 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.45■□□□□ 0.86
ABCA3Q99758 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCA3Q99758 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCA3Q99758 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC20.44■□□□□ 0.86
ABCA3Q99758 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC20.44■□□□□ 0.86
ABCA3Q99758 AC242376.2-201ENST00000619355 883 ntBASIC20.44■□□□□ 0.86
ABCA3Q99758 AC002472.3-201ENST00000640124 621 ntBASIC20.44■□□□□ 0.86
ABCA3Q99758 AC004923.1-202ENST00000642106 209 ntBASIC20.44■□□□□ 0.86
ABCA3Q99758 TBC1D3J-201ENST00000620719 1426 ntBASIC20.44■□□□□ 0.86
ABCA3Q99758 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.44■□□□□ 0.86
ABCA3Q99758 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
ABCA3Q99758 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.44■□□□□ 0.86
ABCA3Q99758 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC20.44■□□□□ 0.86
ABCA3Q99758 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.44■□□□□ 0.86
ABCA3Q99758 RBM8B-201ENST00000555532 525 ntBASIC20.44■□□□□ 0.86
ABCA3Q99758 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.44■□□□□ 0.86
ABCA3Q99758 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCA3Q99758 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 SHC1P1-201ENST00000425230 1745 ntBASIC20.43■□□□□ 0.86
ABCA3Q99758 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.43■□□□□ 0.86
ABCA3Q99758 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 AC009093.2-202ENST00000620513 2079 ntBASIC20.43■□□□□ 0.86
ABCA3Q99758 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.43■□□□□ 0.86
ABCA3Q99758 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.43■□□□□ 0.86
ABCA3Q99758 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA3Q99758 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.42■□□□□ 0.86
ABCA3Q99758 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.42■□□□□ 0.86
ABCA3Q99758 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.42■□□□□ 0.86
ABCA3Q99758 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.42■□□□□ 0.86
ABCA3Q99758 TMCO5B-205ENST00000530020 894 ntBASIC20.42■□□□□ 0.86
ABCA3Q99758 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms