Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HLA-H-201ENST00000383620 1096 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 AC211486.1-202ENST00000416371 468 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC211476.1-201ENST00000503899 468 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.13□□□□□ -0.31
S1PR3Q99500 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC061975.2-201ENST00000581722 295 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC026979.3-201ENST00000607315 403 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC023511.2-201ENST00000618803 211 ntBASIC13.13□□□□□ -0.31
S1PR3Q99500 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
S1PR3Q99500 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 DBET-201ENST00000630918 3363 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 AC067750.1-201ENST00000608826 6545 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 FAM220BP-201ENST00000377689 816 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 MIR1233-2-201ENST00000408138 82 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 MIR1233-1-201ENST00000408722 82 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AC079140.1-201ENST00000508039 487 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 KRT8P48-201ENST00000515599 1220 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.12□□□□□ -0.31
S1PR3Q99500 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.12□□□□□ -0.31
S1PR3Q99500 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 AC243562.1-201ENST00000560672 389 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.12□□□□□ -0.31
S1PR3Q99500 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 UXT-AS1-201ENST00000590504 1525 ntBASIC13.12□□□□□ -0.31
S1PR3Q99500 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.12□□□□□ -0.31
S1PR3Q99500 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
S1PR3Q99500 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
S1PR3Q99500 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.11□□□□□ -0.31
S1PR3Q99500 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms