Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC022494.1-201ENST00000466044 728 ntBASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 DUX4L47-201ENST00000566374 394 ntBASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AL606495.2-201ENST00000605867 535 ntBASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 PCDHA1-201ENST00000378133 2726 ntBASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 AP005117.1-202ENST00000581724 1908 ntBASIC18.27■□□□□ 0.51
CDK5RAP2Q96SN8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDK5RAP2Q96SN8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.27■□□□□ 0.51
CDK5RAP2Q96SN8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK5RAP2Q96SN8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 CICP13-201ENST00000422015 2789 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 AC007551.1-201ENST00000457394 519 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 RPL13AP20-201ENST00000459725 609 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 FAM86HP-204ENST00000513466 959 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 AC009486.1-201ENST00000569860 813 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 LRRC59-203ENST00000576448 1531 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 C2orf69P2-201ENST00000562032 1123 ntBASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP2Q96SN8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AC007787.1-201ENST00000588095 1583 ntBASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AC112693.3-201ENST00000624819 1983 ntBASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AC010328.2-201ENST00000597698 1111 ntBASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AL354989.2-201ENST00000435838 1540 ntBASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP2Q96SN8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TNRC18P3-201ENST00000441896 2691 ntBASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms