Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC211429.1-201ENST00000415277 523 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 MPDU1-223ENST00000582151 728 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 GPR32P1-201ENST00000601788 811 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC097493.4-201ENST00000641197 219 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ST20-AS1-201ENST00000560255 4223 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AC023024.2-201ENST00000623561 1993 ntBASIC14.97□□□□□ -0.01
NR1H4Q96RI1 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AC012306.2-201ENST00000609350 630 ntBASIC14.97□□□□□ -0.01
NR1H4Q96RI1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AC125634.1-201ENST00000438758 1403 ntBASIC14.97□□□□□ -0.01
NR1H4Q96RI1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 PPT1-213ENST00000641319 2388 ntBASIC14.97□□□□□ -0.01
NR1H4Q96RI1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 AC243591.1-201ENST00000452967 1364 ntBASIC14.97□□□□□ -0.01
NR1H4Q96RI1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H4Q96RI1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 AL139385.1-201ENST00000611744 3272 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms