Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 DNM1P30-201ENST00000563586 452 ntBASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 AC013467.2-201ENST00000605472 835 ntBASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 MIR1202-201ENST00000408529 83 ntBASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 LINC02012-201ENST00000608206 1725 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AL161670.2-201ENST00000557650 1227 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC007881.3-201ENST00000608897 607 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC004899.1-201ENST00000424687 1714 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC026316.1-201ENST00000398900 414 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 PCDHB19P-201ENST00000570871 2371 ntBASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CSMD1Q96PZ7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC019193.1-201ENST00000506678 823 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 MIR4649-201ENST00000582839 64 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AL805961.1-201ENST00000642026 753 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms