Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 REXO1L1P-202ENST00000608646 1974 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC106881.1-201ENST00000605849 3329 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC004987.2-201ENST00000395959 1148 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ITCHQ96J02 PDPK2P-202ENST00000562415 1191 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 RARRES2P8-201ENST00000566335 367 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AL138918.1-201ENST00000568306 659 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 MIR4313-201ENST00000580760 101 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 SLC25A6P4-201ENST00000586535 553 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.14■□□□□ 0.01
ITCHQ96J02 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC104109.2-201ENST00000602919 1418 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.14■□□□□ 0.01
ITCHQ96J02 AC018892.3-201ENST00000623986 2499 ntBASIC15.14■□□□□ 0.01
ITCHQ96J02 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITCHQ96J02 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ITCHQ96J02 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 KRT18P2-201ENST00000447938 1258 ntBASIC15.13■□□□□ 0.01
ITCHQ96J02 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.13■□□□□ 0.01
ITCHQ96J02 AC034105.1-201ENST00000563488 319 ntBASIC15.13■□□□□ 0.01
ITCHQ96J02 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.13■□□□□ 0.01
ITCHQ96J02 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.13■□□□□ 0.01
ITCHQ96J02 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.13■□□□□ 0.01
ITCHQ96J02 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.13■□□□□ 0.01
ITCHQ96J02 MYO15B-237ENST00000642007 4893 ntBASIC15.13■□□□□ 0.01
ITCHQ96J02 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 HLA-A-201ENST00000376802 1334 ntBASIC15.13■□□□□ 0.01
ITCHQ96J02 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.13■□□□□ 0.01
ITCHQ96J02 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ITCHQ96J02 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
ITCHQ96J02 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ITCHQ96J02 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
ITCHQ96J02 OR2I1P-209ENST00000641730 5365 ntBASIC15.12■□□□□ 0.01
ITCHQ96J02 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ITCHQ96J02 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ITCHQ96J02 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ITCHQ96J02 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms