Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 AP005117.1-201ENST00000584346 1413 ntBASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 MTDHP3-201ENST00000594186 672 ntBASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.02■□□□□ 0.16
CHMP6Q96FZ7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 AC079781.5-202ENST00000641784 3743 ntBASIC16.02■□□□□ 0.15
CHMP6Q96FZ7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 HCG4-201ENST00000418983 998 ntBASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 KRT18P31-201ENST00000506277 1292 ntBASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 AF228730.7-201ENST00000641842 219 ntBASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 AC010327.5-201ENST00000586923 3061 ntBASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CHMP6Q96FZ7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms