Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC079140.1-201ENST00000508039 487 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC026120.1-201ENST00000611536 926 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AL161645.1-201ENST00000622716 1255 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 Z92544.3-201ENST00000624747 417 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AL627223.1-201ENST00000416693 442 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC093724.1-201ENST00000448659 1027 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 KRT18P34-201ENST00000488218 1270 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC093214.1-201ENST00000511688 1107 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 DOC2GP-204ENST00000639052 2548 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC97Q96F63 LINC01144-201ENST00000626198 1710 ntBASIC16.28■□□□□ 0.2
CCDC97Q96F63 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC97Q96F63 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 AC005237.2-201ENST00000434368 219 ntBASIC16.27■□□□□ 0.2
CCDC97Q96F63 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 RN7SL589P-201ENST00000481268 310 ntBASIC16.27■□□□□ 0.2
CCDC97Q96F63 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 AC093520.2-201ENST00000561830 333 ntBASIC16.27■□□□□ 0.2
CCDC97Q96F63 LINC01225-203ENST00000563550 1244 ntBASIC16.27■□□□□ 0.2
CCDC97Q96F63 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC97Q96F63 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC97Q96F63 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms