Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.27□□□□□ -0.12
PTP4A1Q93096 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.27□□□□□ -0.12
PTP4A1Q93096 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 NFIC-211ENST00000641145 8399 ntBASIC14.27□□□□□ -0.12
PTP4A1Q93096 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PTP4A1Q93096 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 KRT8P44-201ENST00000441609 1350 ntBASIC14.27□□□□□ -0.12
PTP4A1Q93096 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC004987.2-201ENST00000395959 1148 ntBASIC14.27□□□□□ -0.13
PTP4A1Q93096 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 MCCD1P2-201ENST00000423228 335 ntBASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC004832.2-201ENST00000426397 482 ntBASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 AL671883.3-201ENST00000603274 991 ntBASIC14.27□□□□□ -0.13
PTP4A1Q93096 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PTP4A1Q93096 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTP4A1Q93096 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
PTP4A1Q93096 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
PTP4A1Q93096 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AC105233.2-201ENST00000523697 349 ntBASIC14.26□□□□□ -0.13
PTP4A1Q93096 AF228730.5-201ENST00000530288 346 ntBASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AL136982.4-201ENST00000437689 1740 ntBASIC14.26□□□□□ -0.13
PTP4A1Q93096 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.26□□□□□ -0.13
PTP4A1Q93096 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTP4A1Q93096 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms