Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL2Q92772 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL2Q92772 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL2Q92772 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDKL2Q92772 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 ZNF259P1-201ENST00000407656 1365 ntBASIC16.04■□□□□ 0.16
CDKL2Q92772 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKL2Q92772 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL2Q92772 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDKL2Q92772 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.04■□□□□ 0.16
CDKL2Q92772 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.04■□□□□ 0.16
CDKL2Q92772 AC009078.2-202ENST00000463353 338 ntBASIC16.04■□□□□ 0.16
CDKL2Q92772 RPL13AP23-201ENST00000480739 586 ntBASIC16.04■□□□□ 0.16
CDKL2Q92772 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL2Q92772 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKL2Q92772 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.04■□□□□ 0.16
CDKL2Q92772 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKL2Q92772 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 AC008267.7-201ENST00000624570 1194 ntBASIC16.04■□□□□ 0.16
CDKL2Q92772 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL2Q92772 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDKL2Q92772 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL2Q92772 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL2Q92772 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.03■□□□□ 0.16
CDKL2Q92772 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 RNA5SP410-201ENST00000516285 106 ntBASIC16.03■□□□□ 0.16
CDKL2Q92772 FAM86C2P-203ENST00000528684 1004 ntBASIC16.03■□□□□ 0.16
CDKL2Q92772 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKL2Q92772 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AL513190.1-201ENST00000621254 727 ntBASIC16.03■□□□□ 0.16
CDKL2Q92772 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDKL2Q92772 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKL2Q92772 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKL2Q92772 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms