Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PCDHA3-202ENST00000532566 4594 ntBASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKAP2Q8WWK9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 HSPA7-201ENST00000445535 1927 ntBASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 AC136759.1-202ENST00000530858 2194 ntBASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 AC027601.5-201ENST00000624065 2482 ntBASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 LINC01230-201ENST00000625222 3017 ntBASIC15.76■□□□□ 0.11
CKAP2Q8WWK9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 BNIP3P1-202ENST00000550043 1585 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 AC073439.1-201ENST00000624121 1774 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 KRT18P34-201ENST00000488218 1270 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms