Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 FTH1P14-201ENST00000482930 551 ntBASIC19.32■□□□□ 0.68
RTL9Q8NET4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 RNA5SP412-201ENST00000516234 123 ntBASIC19.32■□□□□ 0.68
RTL9Q8NET4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 RN7SL219P-201ENST00000582872 296 ntBASIC19.32■□□□□ 0.68
RTL9Q8NET4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 LINC02447-202ENST00000501888 2146 ntBASIC19.32■□□□□ 0.68
RTL9Q8NET4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL9Q8NET4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL9Q8NET4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL9Q8NET4 AC108725.1-201ENST00000495472 409 ntBASIC19.31■□□□□ 0.68
RTL9Q8NET4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL9Q8NET4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 AC112504.1-201ENST00000623415 1841 ntBASIC19.3■□□□□ 0.68
RTL9Q8NET4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.3■□□□□ 0.68
RTL9Q8NET4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 AC007551.1-201ENST00000457394 519 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms