Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 ECM1P1-201ENST00000604092 1279 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AC079336.7-201ENST00000623428 1078 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 PCDHB19P-201ENST00000570871 2371 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AC009090.5-201ENST00000624886 2285 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AL355334.1-201ENST00000417713 215 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AC008267.1-201ENST00000474858 1069 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 AC126915.1-201ENST00000522847 1038 ntBASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
CFAP43Q8NDM7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CFAP43Q8NDM7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC24.2■■□□□ 1.47
CFAP43Q8NDM7 AC084364.1-201ENST00000551967 1556 ntBASIC24.2■■□□□ 1.47
CFAP43Q8NDM7 AC099398.1-201ENST00000567919 2776 ntBASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 MIR769-201ENST00000390225 118 ntBASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 AL023775.1-201ENST00000454907 1746 ntBASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CFAP43Q8NDM7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 AC022217.1-201ENST00000521069 738 ntBASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 ILF3-AS1-201ENST00000591501 1983 ntBASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 SUPT20HL2-201ENST00000486479 2409 ntBASIC24.19■■□□□ 1.46
CFAP43Q8NDM7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 PGGT1BP2-201ENST00000398621 1028 ntBASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 MIR7845-201ENST00000618396 99 ntBASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms