Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.27□□□□□ -0.28
C11orf42Q8N5U0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C11orf42Q8N5U0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AL645939.2-201ENST00000427340 991 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC105021.1-202ENST00000570572 669 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AL133215.2-201ENST00000609242 977 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC003101.2-201ENST00000612557 442 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 MIR6080-201ENST00000617359 66 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 TUBB3P1-201ENST00000405796 1332 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 SBF1P1-201ENST00000444527 5631 ntBASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf42Q8N5U0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AL353705.2-201ENST00000428243 662 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AL136982.4-201ENST00000437689 1740 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AL691432.1-201ENST00000596308 1422 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 RN7SL828P-201ENST00000607615 303 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 AC007950.2-201ENST00000615045 2347 ntBASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf42Q8N5U0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms