Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SIX5Q8N196 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 AC004987.2-201ENST00000395959 1148 ntBASIC16.22■□□□□ 0.19
SIX5Q8N196 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 AC074338.1-201ENST00000416825 156 ntBASIC16.22■□□□□ 0.19
SIX5Q8N196 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX5Q8N196 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX5Q8N196 AC023310.1-201ENST00000554836 735 ntBASIC16.22■□□□□ 0.19
SIX5Q8N196 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX5Q8N196 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.22■□□□□ 0.19
SIX5Q8N196 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.22■□□□□ 0.19
SIX5Q8N196 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX5Q8N196 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SIX5Q8N196 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
SIX5Q8N196 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX5Q8N196 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX5Q8N196 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX5Q8N196 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX5Q8N196 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 AL607033.1-201ENST00000623900 1599 ntBASIC16.21■□□□□ 0.19
SIX5Q8N196 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.21■□□□□ 0.19
SIX5Q8N196 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
SIX5Q8N196 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIX5Q8N196 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SIX5Q8N196 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.21■□□□□ 0.19
SIX5Q8N196 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 TARDBPP1-201ENST00000442013 1203 ntBASIC16.21■□□□□ 0.19
SIX5Q8N196 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SIX5Q8N196 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 AC079328.1-201ENST00000560358 952 ntBASIC16.21■□□□□ 0.19
SIX5Q8N196 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SIX5Q8N196 AC005252.2-201ENST00000624630 1141 ntBASIC16.21■□□□□ 0.19
SIX5Q8N196 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SIX5Q8N196 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIX5Q8N196 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX5Q8N196 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SIX5Q8N196 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
SIX5Q8N196 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX5Q8N196 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX5Q8N196 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 FLJ38576-201ENST00000623820 2459 ntBASIC16.2■□□□□ 0.18
SIX5Q8N196 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIX5Q8N196 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.2■□□□□ 0.18
SIX5Q8N196 Z93015.1-201ENST00000451718 390 ntBASIC16.2■□□□□ 0.18
SIX5Q8N196 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX5Q8N196 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.2■□□□□ 0.18
SIX5Q8N196 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 401.8 ms