Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 REXO1L1P-202ENST00000608646 1974 ntBASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 C2orf27AP3-201ENST00000434123 579 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AL450472.2-201ENST00000603663 1156 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AL118558.3-201ENST00000607414 1079 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AL354718.3-201ENST00000616414 581 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 CR382287.1-201ENST00000623954 586 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 AL139099.5-201ENST00000635274 300 ntBASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEFF1Q8IYR6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ZNF767P-206ENST00000513792 565 ntBASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEFF1Q8IYR6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEFF1Q8IYR6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms