Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CDC14C-201ENST00000428251 1719 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 LINC02447-202ENST00000501888 2146 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 ELK1P1-201ENST00000485699 580 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CR383656.12-201ENST00000549567 513 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 RRP7BP-205ENST00000566851 833 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 AC036164.1-201ENST00000570544 333 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 AC124067.4-201ENST00000519691 2379 ntBASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN4BQ8IWT1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 RN7SL399P-201ENST00000471648 279 ntBASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN4BQ8IWT1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 INE1-201ENST00000456273 945 ntBASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms