Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 TMBIM7P-203ENST00000641617 1718 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AL139010.1-201ENST00000454878 894 ntBASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AC005829.1-201ENST00000570002 483 ntBASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AC022145.2-201ENST00000598203 171 ntBASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00346Q8IVM7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 RARRES2P9-201ENST00000565168 469 ntBASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 MIR4313-201ENST00000580760 101 ntBASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 MIR4469-201ENST00000583919 79 ntBASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 AC105339.1-204ENST00000636249 355 ntBASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms