Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
COL23A1Q86Y22 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL23A1Q86Y22 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL23A1Q86Y22 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL23A1Q86Y22 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
COL23A1Q86Y22 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.52■□□□□ 0.71
COL23A1Q86Y22 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL23A1Q86Y22 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 POM121L8P-201ENST00000417732 1281 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 POM121L9P-203ENST00000441984 1285 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 AC104073.2-201ENST00000453737 312 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CEP164P1-201ENST00000455142 418 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 AC021723.1-201ENST00000486306 515 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 AL023803.2-201ENST00000620080 638 ntBASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.51■□□□□ 0.71
COL23A1Q86Y22 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 FGFR3P1-201ENST00000449999 601 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 KRT18P66-201ENST00000452970 1269 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RN7SL818P-201ENST00000485099 259 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 NPM1P43-201ENST00000558669 786 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AC103988.2-201ENST00000561804 725 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 BNIP3P13-201ENST00000599968 566 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 RN7SL725P-201ENST00000606439 259 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AL353770.1-201ENST00000614915 403 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AL805961.1-203ENST00000641078 1258 ntBASIC19.5■□□□□ 0.71
COL23A1Q86Y22 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL23A1Q86Y22 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms