Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AC126365.1-201ENST00000578585 1514 ntBASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AP006288.1-201ENST00000446065 395 ntBASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AC092865.5-201ENST00000545435 363 ntBASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 MIR6080-201ENST00000617359 66 ntBASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 TCAF2P1-201ENST00000291129 2421 ntBASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHD1LQ86WJ1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 AL079307.3-201ENST00000556114 283 ntBASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 AC027612.4-201ENST00000605371 583 ntBASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD1LQ86WJ1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHD1LQ86WJ1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD1LQ86WJ1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD1LQ86WJ1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.52■□□□□ 0.71
CHD1LQ86WJ1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 CNN2P11-201ENST00000429351 262 ntBASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 TARDBPP1-201ENST00000442013 1203 ntBASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AL512356.2-201ENST00000546955 174 ntBASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AC134684.3-201ENST00000641758 218 ntBASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD1LQ86WJ1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHD1LQ86WJ1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD1LQ86WJ1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms