Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AL365209.1-201ENST00000624418 6473 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 MYCLP1-201ENST00000372451 1075 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 FGFR3P6-201ENST00000457012 610 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 AP002469.2-201ENST00000531724 424 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 AC109462.3-201ENST00000573934 613 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 AL139288.1-201ENST00000623748 933 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PACS2Q86VP3 OR2I1P-210ENST00000642037 4691 ntBASIC16.06■□□□□ 0.16
PACS2Q86VP3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.06■□□□□ 0.16
PACS2Q86VP3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.05■□□□□ 0.16
PACS2Q86VP3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AC073648.2-201ENST00000510116 352 ntBASIC16.05■□□□□ 0.16
PACS2Q86VP3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AC009712.1-201ENST00000564938 316 ntBASIC16.05■□□□□ 0.16
PACS2Q86VP3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AC073592.5-201ENST00000624854 528 ntBASIC16.05■□□□□ 0.16
PACS2Q86VP3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AC112693.3-201ENST00000624819 1983 ntBASIC16.05■□□□□ 0.16
PACS2Q86VP3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
PACS2Q86VP3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PACS2Q86VP3 AL049757.1-201ENST00000616842 1596 ntBASIC16.04■□□□□ 0.16
PACS2Q86VP3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PACS2Q86VP3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.04■□□□□ 0.16
PACS2Q86VP3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PACS2Q86VP3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PACS2Q86VP3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PACS2Q86VP3 AL353593.2-201ENST00000602529 1483 ntBASIC16.04■□□□□ 0.16
PACS2Q86VP3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PACS2Q86VP3 BX640514.1-201ENST00000583223 1918 ntBASIC16.04■□□□□ 0.16
PACS2Q86VP3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms