Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 KRT18P25-201ENST00000508931 1278 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AL160314.3-201ENST00000556041 767 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 MIR4750-201ENST00000584564 56 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC106886.4-201ENST00000623557 2502 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AC079178.1-201ENST00000420915 656 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ME2P1-201ENST00000426028 1970 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AC132872.4-202ENST00000622924 2756 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 LINC01144-201ENST00000626198 1710 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AGGF1P2-201ENST00000426656 2106 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 RPSAP31-201ENST00000416648 895 ntBASIC10.79□□□□□ -0.68
CSMD3Q7Z407 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CSMD3Q7Z407 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 IGLV3-15-201ENST00000518356 244 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MIR4783-201ENST00000580343 82 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms