Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AC002472.2-201ENST00000442739 958 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 SERBP1P5-201ENST00000510079 1181 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 RN7SL204P-201ENST00000582831 262 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AC097359.3-201ENST00000603982 1210 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AC008894.3-201ENST00000624324 3103 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC236430.1-201ENST00000402231 743 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TARDBPP1-201ENST00000442013 1203 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SPDYE18-201ENST00000510091 1050 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 MIR3197-201ENST00000582241 73 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 LINC02560-201ENST00000596379 459 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC008761.3-201ENST00000624803 892 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 AC004461.2-201ENST00000629517 803 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 DOC2GP-204ENST00000639052 2548 ntBASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF44Q7L0R7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms