Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LINC02199-201ENST00000506655 2702 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 RN7SL752P-201ENST00000463779 287 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AC132938.2-201ENST00000579188 680 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AC099568.2-201ENST00000609194 695 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AL591163.1-201ENST00000641757 987 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AC126755.1-201ENST00000525846 6405 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AL662844.4-201ENST00000606367 2838 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.31□□□□□ -0.12
RTL6Q6ICC9 AL592424.1-201ENST00000563624 1536 ntBASIC14.31□□□□□ -0.12
RTL6Q6ICC9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 652.4 ms