Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 LINC00552-201ENST00000625151 2579 ntBASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 AL592309.1-201ENST00000443127 649 ntBASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 AC084364.1-201ENST00000551967 1556 ntBASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 RPL5P21-201ENST00000404620 815 ntBASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 MKNK2P1-201ENST00000437526 628 ntBASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKAL1Q5VV42 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 SPDYE17-201ENST00000412399 783 ntBASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AC004832.2-201ENST00000426397 482 ntBASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AL121894.2-201ENST00000602977 491 ntBASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 AC055717.3-201ENST00000622967 595 ntBASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKAL1Q5VV42 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKAL1Q5VV42 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CDKAL1Q5VV42 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.27■□□□□ 0.35
CDKAL1Q5VV42 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKAL1Q5VV42 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 279 ms