Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 AC005840.4-201ENST00000541242 2494 ntBASIC12.66□□□□□ -0.38
FAM78BQ5VT40 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM78BQ5VT40 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 AC021087.4-201ENST00000563761 564 ntBASIC12.65□□□□□ -0.38
FAM78BQ5VT40 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 GGTLC5P-201ENST00000617623 998 ntBASIC12.65□□□□□ -0.38
FAM78BQ5VT40 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM78BQ5VT40 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FAM78BQ5VT40 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
FAM78BQ5VT40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FAM78BQ5VT40 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 AC012569.1-201ENST00000591191 1524 ntBASIC12.64□□□□□ -0.39
FAM78BQ5VT40 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM78BQ5VT40 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms